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Computational biology

Decode Life: AI & Computational Biology

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Evaluating biological models

A confusion matrix counts true positives, false positives, true negatives and false negatives.

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A confusion matrix counts true positives, false positives, true negatives and false negatives. Sensitivity or recall measures detected positives; specificity measures rejected negatives; precision measures how many positive predictions were truly positive. Accuracy can hide failure on a rare class. ROC/AUC summarizes discrimination across thresholds, but calibration and real costs of errors also matter.

Worked example

For 100 samples with five cases, predicting everyone healthy gives 95% accuracy and 0% sensitivity. A screening task may favor sensitivity while tracking false alarms.